Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RxrbP28704 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RxrbP28704 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RxrbP28704 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RxrbP28704 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RxrbP28704 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.6■□□□□ 0.73
RxrbP28704 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RxrbP28704 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RxrbP28704 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.59■□□□□ 0.73
RxrbP28704 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.59■□□□□ 0.73
RxrbP28704 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.59■□□□□ 0.73
RxrbP28704 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RxrbP28704 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RxrbP28704 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RxrbP28704 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RxrbP28704 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RxrbP28704 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.58■□□□□ 0.73
RxrbP28704 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RxrbP28704 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.58■□□□□ 0.73
RxrbP28704 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RxrbP28704 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RxrbP28704 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RxrbP28704 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RxrbP28704 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RxrbP28704 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.57■□□□□ 0.72
RxrbP28704 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.57■□□□□ 0.72
RxrbP28704 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RxrbP28704 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RxrbP28704 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RxrbP28704 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RxrbP28704 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RxrbP28704 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RxrbP28704 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RxrbP28704 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.55■□□□□ 0.72
RxrbP28704 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.55■□□□□ 0.72
RxrbP28704 Gm40881-201ENSMUST00000223397 166 ntBASIC19.55■□□□□ 0.72
RxrbP28704 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RxrbP28704 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RxrbP28704 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RxrbP28704 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RxrbP28704 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.54■□□□□ 0.72
RxrbP28704 Gm7143-201ENSMUST00000222811 859 ntBASIC19.54■□□□□ 0.72
RxrbP28704 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
RxrbP28704 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RxrbP28704 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RxrbP28704 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RxrbP28704 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.53■□□□□ 0.72
RxrbP28704 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RxrbP28704 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RxrbP28704 Mir6236-201ENSMUST00000184437 123 ntBASIC19.53■□□□□ 0.72
RxrbP28704 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RxrbP28704 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RxrbP28704 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RxrbP28704 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
RxrbP28704 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RxrbP28704 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms