Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.36■□□□□ 0.69
Nckap1P28660 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.36■□□□□ 0.69
Nckap1P28660 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nckap1P28660 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nckap1P28660 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nckap1P28660 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.36■□□□□ 0.69
Nckap1P28660 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nckap1P28660 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nckap1P28660 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nckap1P28660 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.35■□□□□ 0.69
Nckap1P28660 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.35■□□□□ 0.69
Nckap1P28660 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nckap1P28660 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nckap1P28660 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Gm7514-201ENSMUST00000209475 934 ntBASIC19.34■□□□□ 0.69
Nckap1P28660 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.34■□□□□ 0.69
Nckap1P28660 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.34■□□□□ 0.69
Nckap1P28660 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nckap1P28660 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nckap1P28660 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nckap1P28660 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nckap1P28660 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nckap1P28660 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nckap1P28660 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.33■□□□□ 0.68
Nckap1P28660 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nckap1P28660 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nckap1P28660 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nckap1P28660 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nckap1P28660 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.32■□□□□ 0.68
Nckap1P28660 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.32■□□□□ 0.68
Nckap1P28660 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1P28660 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nckap1P28660 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Nckap1P28660 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Gm12933-201ENSMUST00000120203 872 ntBASIC19.3■□□□□ 0.68
Nckap1P28660 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.3■□□□□ 0.68
Nckap1P28660 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1P28660 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nckap1P28660 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1P28660 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1P28660 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nckap1P28660 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.29■□□□□ 0.68
Nckap1P28660 AA386476-201ENSMUST00000098781 1665 ntBASIC19.29■□□□□ 0.68
Nckap1P28660 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1P28660 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1P28660 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1P28660 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nckap1P28660 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1P28660 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Nckap1P28660 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.28■□□□□ 0.68
Nckap1P28660 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.28■□□□□ 0.68
Nckap1P28660 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.28■□□□□ 0.68
Nckap1P28660 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.28■□□□□ 0.68
Nckap1P28660 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1P28660 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1P28660 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1P28660 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1P28660 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms