Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.03■□□□□ 0.32
SnrpbP27048 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.03■□□□□ 0.32
SnrpbP27048 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.03■□□□□ 0.32
SnrpbP27048 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SnrpbP27048 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SnrpbP27048 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SnrpbP27048 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SnrpbP27048 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SnrpbP27048 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.02■□□□□ 0.32
SnrpbP27048 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SnrpbP27048 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.02■□□□□ 0.32
SnrpbP27048 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SnrpbP27048 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SnrpbP27048 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SnrpbP27048 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SnrpbP27048 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SnrpbP27048 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SnrpbP27048 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SnrpbP27048 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SnrpbP27048 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SnrpbP27048 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SnrpbP27048 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SnrpbP27048 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SnrpbP27048 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SnrpbP27048 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SnrpbP27048 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SnrpbP27048 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SnrpbP27048 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SnrpbP27048 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.99■□□□□ 0.31
SnrpbP27048 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.99■□□□□ 0.31
SnrpbP27048 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.99■□□□□ 0.31
SnrpbP27048 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 Rarb-207ENSMUST00000225921 2756 ntBASIC16.99■□□□□ 0.31
SnrpbP27048 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SnrpbP27048 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.99■□□□□ 0.31
SnrpbP27048 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.98■□□□□ 0.31
SnrpbP27048 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SnrpbP27048 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SnrpbP27048 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Gm7143-201ENSMUST00000222811 859 ntBASIC16.98■□□□□ 0.31
SnrpbP27048 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.98■□□□□ 0.31
SnrpbP27048 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.98■□□□□ 0.31
SnrpbP27048 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SnrpbP27048 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SnrpbP27048 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.97■□□□□ 0.31
SnrpbP27048 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SnrpbP27048 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SnrpbP27048 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 Mir6236-201ENSMUST00000184437 123 ntBASIC16.97■□□□□ 0.31
SnrpbP27048 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SnrpbP27048 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.97■□□□□ 0.31
SnrpbP27048 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SnrpbP27048 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SnrpbP27048 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SnrpbP27048 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms