Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.63■□□□□ 0.41
Cbx3P23198 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cbx3P23198 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cbx3P23198 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cbx3P23198 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cbx3P23198 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cbx3P23198 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cbx3P23198 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cbx3P23198 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cbx3P23198 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.61■□□□□ 0.41
Cbx3P23198 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cbx3P23198 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.61■□□□□ 0.41
Cbx3P23198 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cbx3P23198 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cbx3P23198 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.6■□□□□ 0.41
Cbx3P23198 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.6■□□□□ 0.41
Cbx3P23198 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cbx3P23198 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cbx3P23198 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.59■□□□□ 0.41
Cbx3P23198 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.59■□□□□ 0.41
Cbx3P23198 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cbx3P23198 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Cbx3P23198 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.59■□□□□ 0.41
Cbx3P23198 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cbx3P23198 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cbx3P23198 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cbx3P23198 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cbx3P23198 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cbx3P23198 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.58■□□□□ 0.4
Cbx3P23198 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cbx3P23198 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cbx3P23198 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cbx3P23198 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cbx3P23198 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cbx3P23198 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.57■□□□□ 0.4
Cbx3P23198 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cbx3P23198 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.57■□□□□ 0.4
Cbx3P23198 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.57■□□□□ 0.4
Cbx3P23198 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cbx3P23198 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cbx3P23198 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cbx3P23198 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.57■□□□□ 0.4
Cbx3P23198 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cbx3P23198 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cbx3P23198 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Cbx3P23198 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cbx3P23198 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cbx3P23198 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cbx3P23198 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cbx3P23198 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms