Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn1P18608 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmgn1P18608 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hmgn1P18608 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hmgn1P18608 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 AA386476-201ENSMUST00000098781 1665 ntBASIC17.79■□□□□ 0.44
Hmgn1P18608 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Hmgn1P18608 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmgn1P18608 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.78■□□□□ 0.44
Hmgn1P18608 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmgn1P18608 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hmgn1P18608 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmgn1P18608 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hmgn1P18608 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmgn1P18608 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn1P18608 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmgn1P18608 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
Hmgn1P18608 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hmgn1P18608 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.77■□□□□ 0.43
Hmgn1P18608 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn1P18608 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn1P18608 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hmgn1P18608 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.76■□□□□ 0.43
Hmgn1P18608 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.76■□□□□ 0.43
Hmgn1P18608 Etf1-202ENSMUST00000180351 108 ntBASIC17.76■□□□□ 0.43
Hmgn1P18608 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.76■□□□□ 0.43
Hmgn1P18608 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmgn1P18608 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hmgn1P18608 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Hmgn1P18608 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgn1P18608 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmgn1P18608 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmgn1P18608 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hmgn1P18608 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.75■□□□□ 0.43
Hmgn1P18608 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgn1P18608 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn1P18608 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn1P18608 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn1P18608 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmgn1P18608 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hmgn1P18608 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgn1P18608 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgn1P18608 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hmgn1P18608 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn1P18608 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgn1P18608 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn1P18608 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hmgn1P18608 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn1P18608 BC021767-201ENSMUST00000126387 1716 ntBASIC17.72■□□□□ 0.43
Hmgn1P18608 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn1P18608 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmgn1P18608 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgn1P18608 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms