Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa9P09631 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.61■□□□□ 0.73
Hoxa9P09631 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.61■□□□□ 0.73
Hoxa9P09631 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hoxa9P09631 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa9P09631 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa9P09631 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa9P09631 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa9P09631 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxa9P09631 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxa9P09631 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxa9P09631 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Gm7514-201ENSMUST00000209475 934 ntBASIC19.59■□□□□ 0.73
Hoxa9P09631 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.59■□□□□ 0.73
Hoxa9P09631 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Hoxa9P09631 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxa9P09631 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa9P09631 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa9P09631 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa9P09631 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hoxa9P09631 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa9P09631 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa9P09631 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.58■□□□□ 0.72
Hoxa9P09631 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa9P09631 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa9P09631 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hoxa9P09631 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.57■□□□□ 0.72
Hoxa9P09631 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.57■□□□□ 0.72
Hoxa9P09631 Gm27011-201ENSMUST00000182352 972 ntBASIC19.57■□□□□ 0.72
Hoxa9P09631 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.57■□□□□ 0.72
Hoxa9P09631 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa9P09631 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.56■□□□□ 0.72
Hoxa9P09631 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa9P09631 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.55■□□□□ 0.72
Hoxa9P09631 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxa9P09631 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.55■□□□□ 0.72
Hoxa9P09631 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxa9P09631 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa9P09631 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hoxa9P09631 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.54■□□□□ 0.72
Hoxa9P09631 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Hoxa9P09631 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hoxa9P09631 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa9P09631 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa9P09631 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa9P09631 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa9P09631 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxa9P09631 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa9P09631 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hoxa9P09631 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.52■□□□□ 0.72
Hoxa9P09631 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.52■□□□□ 0.72
Hoxa9P09631 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hoxa9P09631 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa9P09631 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms