Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CopeO89079 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CopeO89079 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.04■□□□□ 0.8
CopeO89079 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.04■□□□□ 0.8
CopeO89079 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CopeO89079 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CopeO89079 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CopeO89079 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CopeO89079 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CopeO89079 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.03■□□□□ 0.8
CopeO89079 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.03■□□□□ 0.8
CopeO89079 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.03■□□□□ 0.8
CopeO89079 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.03■□□□□ 0.8
CopeO89079 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CopeO89079 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CopeO89079 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.02■□□□□ 0.8
CopeO89079 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.02■□□□□ 0.8
CopeO89079 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.02■□□□□ 0.8
CopeO89079 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CopeO89079 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.02■□□□□ 0.8
CopeO89079 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CopeO89079 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CopeO89079 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CopeO89079 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.01■□□□□ 0.79
CopeO89079 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.01■□□□□ 0.79
CopeO89079 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CopeO89079 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.01■□□□□ 0.79
CopeO89079 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.01■□□□□ 0.79
CopeO89079 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CopeO89079 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20■□□□□ 0.79
CopeO89079 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CopeO89079 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20■□□□□ 0.79
CopeO89079 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20■□□□□ 0.79
CopeO89079 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CopeO89079 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20■□□□□ 0.79
CopeO89079 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CopeO89079 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.99■□□□□ 0.79
CopeO89079 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CopeO89079 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CopeO89079 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.99■□□□□ 0.79
CopeO89079 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.99■□□□□ 0.79
CopeO89079 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CopeO89079 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CopeO89079 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CopeO89079 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.98■□□□□ 0.79
CopeO89079 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CopeO89079 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 AA386476-201ENSMUST00000098781 1665 ntBASIC19.98■□□□□ 0.79
CopeO89079 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CopeO89079 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CopeO89079 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.98■□□□□ 0.79
CopeO89079 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CopeO89079 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.98■□□□□ 0.79
CopeO89079 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CopeO89079 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CopeO89079 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CopeO89079 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CopeO89079 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms