Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.72□□□□□ -0.21
Sh2d1aO88890 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh2d1aO88890 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2d1aO88890 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2d1aO88890 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh2d1aO88890 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.7□□□□□ -0.22
Sh2d1aO88890 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.7□□□□□ -0.22
Sh2d1aO88890 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.7□□□□□ -0.22
Sh2d1aO88890 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh2d1aO88890 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.69□□□□□ -0.22
Sh2d1aO88890 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh2d1aO88890 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.68□□□□□ -0.22
Sh2d1aO88890 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh2d1aO88890 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.67□□□□□ -0.22
Sh2d1aO88890 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh2d1aO88890 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh2d1aO88890 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh2d1aO88890 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh2d1aO88890 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh2d1aO88890 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh2d1aO88890 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms