Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ShdO88834 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShdO88834 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.9■□□□□ 0.78
ShdO88834 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.9■□□□□ 0.78
ShdO88834 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
ShdO88834 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShdO88834 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ShdO88834 Iqck-206ENSMUST00000208658 2891 ntBASIC19.89■□□□□ 0.77
ShdO88834 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Serp2-204ENSMUST00000228055 705 ntBASIC19.89■□□□□ 0.77
ShdO88834 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShdO88834 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.88■□□□□ 0.77
ShdO88834 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.88■□□□□ 0.77
ShdO88834 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ShdO88834 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.88■□□□□ 0.77
ShdO88834 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShdO88834 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShdO88834 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.87■□□□□ 0.77
ShdO88834 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.87■□□□□ 0.77
ShdO88834 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShdO88834 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ShdO88834 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShdO88834 Gm43173-201ENSMUST00000202246 593 ntBASIC19.87■□□□□ 0.77
ShdO88834 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.87■□□□□ 0.77
ShdO88834 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShdO88834 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShdO88834 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShdO88834 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.86■□□□□ 0.77
ShdO88834 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShdO88834 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShdO88834 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ShdO88834 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ShdO88834 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ShdO88834 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShdO88834 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShdO88834 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.85■□□□□ 0.77
ShdO88834 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShdO88834 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.85■□□□□ 0.77
ShdO88834 Gm8493-201ENSMUST00000196881 489 ntBASIC19.85■□□□□ 0.77
ShdO88834 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShdO88834 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShdO88834 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.84■□□□□ 0.77
ShdO88834 Gm6139-201ENSMUST00000079261 882 ntBASIC19.84■□□□□ 0.77
ShdO88834 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShdO88834 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ShdO88834 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ShdO88834 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
ShdO88834 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShdO88834 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.83■□□□□ 0.77
ShdO88834 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ShdO88834 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ShdO88834 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.83■□□□□ 0.76
ShdO88834 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ShdO88834 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ShdO88834 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.82■□□□□ 0.76
ShdO88834 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.82■□□□□ 0.76
ShdO88834 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShdO88834 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.81■□□□□ 0.76
ShdO88834 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ShdO88834 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms