Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
Becn1O88597 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Becn1O88597 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Becn1O88597 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Becn1O88597 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.15■■□□□ 1.14
Becn1O88597 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.15■■□□□ 1.14
Becn1O88597 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.15■■□□□ 1.14
Becn1O88597 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Becn1O88597 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Becn1O88597 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Becn1O88597 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Becn1O88597 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Becn1O88597 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.13
Becn1O88597 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.14■■□□□ 1.13
Becn1O88597 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Becn1O88597 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Becn1O88597 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Becn1O88597 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Becn1O88597 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Becn1O88597 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.13■■□□□ 1.13
Becn1O88597 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Becn1O88597 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.12■■□□□ 1.13
Becn1O88597 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Becn1O88597 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Becn1O88597 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Becn1O88597 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Becn1O88597 Grk6-206ENSMUST00000224995 2971 ntBASIC22.11■■□□□ 1.13
Becn1O88597 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Gm15546-201ENSMUST00000122095 826 ntBASIC22.11■■□□□ 1.13
Becn1O88597 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Becn1O88597 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.11■■□□□ 1.13
Becn1O88597 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Becn1O88597 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Becn1O88597 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Becn1O88597 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.1■■□□□ 1.13
Becn1O88597 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.1■■□□□ 1.13
Becn1O88597 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Becn1O88597 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Becn1O88597 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Becn1O88597 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Gm45606-201ENSMUST00000209836 2795 ntBASIC22.09■■□□□ 1.13
Becn1O88597 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.09■■□□□ 1.13
Becn1O88597 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Becn1O88597 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Becn1O88597 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms