Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cops6O88545 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.92■■□□□ 1.42
Cops6O88545 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.92■■□□□ 1.42
Cops6O88545 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cops6O88545 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Cops6O88545 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cops6O88545 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Cops6O88545 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cops6O88545 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Cops6O88545 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cops6O88545 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Cops6O88545 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cops6O88545 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.9■■□□□ 1.42
Cops6O88545 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Cops6O88545 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cops6O88545 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.9■■□□□ 1.42
Cops6O88545 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cops6O88545 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cops6O88545 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Cops6O88545 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.89■■□□□ 1.41
Cops6O88545 Mir5133-201ENSMUST00000174955 77 ntBASIC23.89■■□□□ 1.41
Cops6O88545 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.89■■□□□ 1.41
Cops6O88545 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Cops6O88545 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cops6O88545 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cops6O88545 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cops6O88545 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cops6O88545 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.88■■□□□ 1.41
Cops6O88545 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.88■■□□□ 1.41
Cops6O88545 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.88■■□□□ 1.41
Cops6O88545 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cops6O88545 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cops6O88545 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Cops6O88545 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cops6O88545 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cops6O88545 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cops6O88545 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.87■■□□□ 1.41
Cops6O88545 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cops6O88545 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cops6O88545 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cops6O88545 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.87■■□□□ 1.41
Cops6O88545 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.86■■□□□ 1.41
Cops6O88545 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Gm13534-201ENSMUST00000121169 513 ntBASIC23.86■■□□□ 1.41
Cops6O88545 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cops6O88545 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cops6O88545 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Cops6O88545 Gm6420-201ENSMUST00000193885 723 ntBASIC23.85■■□□□ 1.41
Cops6O88545 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cops6O88545 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.84■■□□□ 1.41
Cops6O88545 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Cops6O88545 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.84■■□□□ 1.41
Cops6O88545 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cops6O88545 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.84■■□□□ 1.41
Cops6O88545 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.83■■□□□ 1.41
Cops6O88545 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Cops6O88545 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Cops6O88545 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cops6O88545 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Cops6O88545 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Cops6O88545 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.82■■□□□ 1.4
Cops6O88545 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.82■■□□□ 1.4
Cops6O88545 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cops6O88545 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Cops6O88545 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Cops6O88545 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cops6O88545 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Cops6O88545 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.8■■□□□ 1.4
Cops6O88545 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cops6O88545 Gm12441-201ENSMUST00000121806 588 ntBASIC23.8■■□□□ 1.4
Cops6O88545 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms