Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.09■□□□□ 0.17
SncaO55042 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SncaO55042 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.09■□□□□ 0.17
SncaO55042 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaO55042 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaO55042 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SncaO55042 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SncaO55042 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaO55042 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SncaO55042 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaO55042 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SncaO55042 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SncaO55042 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SncaO55042 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.07■□□□□ 0.16
SncaO55042 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SncaO55042 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SncaO55042 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.06■□□□□ 0.16
SncaO55042 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SncaO55042 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
SncaO55042 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.06■□□□□ 0.16
SncaO55042 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SncaO55042 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SncaO55042 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SncaO55042 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SncaO55042 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SncaO55042 Etf1-202ENSMUST00000180351 108 ntBASIC16.05■□□□□ 0.16
SncaO55042 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.05■□□□□ 0.16
SncaO55042 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.05■□□□□ 0.16
SncaO55042 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SncaO55042 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SncaO55042 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SncaO55042 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SncaO55042 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SncaO55042 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.04■□□□□ 0.16
SncaO55042 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.04■□□□□ 0.16
SncaO55042 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SncaO55042 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.04■□□□□ 0.16
SncaO55042 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SncaO55042 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SncaO55042 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.03■□□□□ 0.16
SncaO55042 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.03■□□□□ 0.16
SncaO55042 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SncaO55042 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SncaO55042 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SncaO55042 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SncaO55042 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.02■□□□□ 0.16
SncaO55042 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SncaO55042 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SncaO55042 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.02■□□□□ 0.16
SncaO55042 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SncaO55042 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SncaO55042 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SncaO55042 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SncaO55042 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SncaO55042 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms