Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.85■□□□□ 0.61
Cacna1bO55017 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.85■□□□□ 0.61
Cacna1bO55017 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1bO55017 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacna1bO55017 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacna1bO55017 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.84■□□□□ 0.61
Cacna1bO55017 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1bO55017 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1bO55017 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1bO55017 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1bO55017 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacna1bO55017 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacna1bO55017 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1bO55017 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1bO55017 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1bO55017 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1bO55017 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1bO55017 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1bO55017 Gm38205-201ENSMUST00000192243 258 ntBASIC18.82■□□□□ 0.6
Cacna1bO55017 Gm5643-201ENSMUST00000117081 966 ntBASIC18.81■□□□□ 0.6
Cacna1bO55017 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.81■□□□□ 0.6
Cacna1bO55017 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1bO55017 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1bO55017 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacna1bO55017 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1bO55017 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.79■□□□□ 0.6
Cacna1bO55017 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1bO55017 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1bO55017 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cacna1bO55017 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacna1bO55017 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms