Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lsm2O35900 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lsm2O35900 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lsm2O35900 Grk6-206ENSMUST00000224995 2971 ntBASIC17.37■□□□□ 0.37
Lsm2O35900 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.36■□□□□ 0.37
Lsm2O35900 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.36■□□□□ 0.37
Lsm2O35900 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm2O35900 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm2O35900 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.35■□□□□ 0.37
Lsm2O35900 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.35■□□□□ 0.37
Lsm2O35900 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Lsm2O35900 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.35■□□□□ 0.37
Lsm2O35900 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.35■□□□□ 0.37
Lsm2O35900 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.35■□□□□ 0.37
Lsm2O35900 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm2O35900 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm2O35900 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm2O35900 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm2O35900 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.35■□□□□ 0.37
Lsm2O35900 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm2O35900 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.34■□□□□ 0.37
Lsm2O35900 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lsm2O35900 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm2O35900 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm2O35900 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm2O35900 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Lsm2O35900 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm2O35900 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm2O35900 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.33■□□□□ 0.36
Lsm2O35900 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm2O35900 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.36
Lsm2O35900 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm2O35900 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Lsm2O35900 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.33■□□□□ 0.36
Lsm2O35900 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.32■□□□□ 0.36
Lsm2O35900 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.32■□□□□ 0.36
Lsm2O35900 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm2O35900 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lsm2O35900 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Lsm2O35900 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Gm43530-201ENSMUST00000195920 274 ntBASIC17.31■□□□□ 0.36
Lsm2O35900 AA386476-201ENSMUST00000098781 1665 ntBASIC17.31■□□□□ 0.36
Lsm2O35900 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm2O35900 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm2O35900 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm2O35900 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms