Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Matn3O35701 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Matn3O35701 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Matn3O35701 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Matn3O35701 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Matn3O35701 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Matn3O35701 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Matn3O35701 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.63■□□□□ 0.41
Matn3O35701 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.63■□□□□ 0.41
Matn3O35701 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.63■□□□□ 0.41
Matn3O35701 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Matn3O35701 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.62■□□□□ 0.41
Matn3O35701 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.62■□□□□ 0.41
Matn3O35701 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Matn3O35701 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.61■□□□□ 0.41
Matn3O35701 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.61■□□□□ 0.41
Matn3O35701 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Matn3O35701 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.61■□□□□ 0.41
Matn3O35701 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Matn3O35701 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Matn3O35701 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.6■□□□□ 0.41
Matn3O35701 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Matn3O35701 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Matn3O35701 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.59■□□□□ 0.41
Matn3O35701 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.59■□□□□ 0.41
Matn3O35701 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Matn3O35701 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Matn3O35701 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Matn3O35701 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.41
Matn3O35701 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Matn3O35701 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Matn3O35701 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Matn3O35701 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Matn3O35701 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Matn3O35701 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Matn3O35701 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.58■□□□□ 0.4
Matn3O35701 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Matn3O35701 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms