Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11aO35305 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11aO35305 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf11aO35305 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Gm40848-201ENSMUST00000221998 324 ntBASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf11aO35305 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Tnfrsf11aO35305 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tnfrsf11aO35305 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Gm26833-201ENSMUST00000180899 440 ntBASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Iqck-206ENSMUST00000208658 2891 ntBASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Tnfrsf11aO35305 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf11aO35305 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tnfrsf11aO35305 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Gm11421-201ENSMUST00000122124 294 ntBASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf11aO35305 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Tnfrsf11aO35305 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Tnfrsf11aO35305 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf11aO35305 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfrsf11aO35305 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Tnfrsf11aO35305 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms