Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trove2O08848 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.84■□□□□ 0.77
Trove2O08848 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trove2O08848 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trove2O08848 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.84■□□□□ 0.77
Trove2O08848 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.84■□□□□ 0.77
Trove2O08848 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trove2O08848 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trove2O08848 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trove2O08848 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trove2O08848 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trove2O08848 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trove2O08848 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.83■□□□□ 0.77
Trove2O08848 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.83■□□□□ 0.77
Trove2O08848 Gm7417-201ENSMUST00000192950 473 ntBASIC19.83■□□□□ 0.77
Trove2O08848 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.83■□□□□ 0.76
Trove2O08848 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trove2O08848 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
Trove2O08848 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trove2O08848 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trove2O08848 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trove2O08848 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trove2O08848 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.82■□□□□ 0.76
Trove2O08848 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Etf1-202ENSMUST00000180351 108 ntBASIC19.82■□□□□ 0.76
Trove2O08848 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trove2O08848 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trove2O08848 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trove2O08848 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trove2O08848 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trove2O08848 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trove2O08848 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.8■□□□□ 0.76
Trove2O08848 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.8■□□□□ 0.76
Trove2O08848 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.8■□□□□ 0.76
Trove2O08848 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Trove2O08848 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trove2O08848 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Trove2O08848 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trove2O08848 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trove2O08848 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trove2O08848 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trove2O08848 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trove2O08848 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trove2O08848 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trove2O08848 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Trove2O08848 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.78■□□□□ 0.76
Trove2O08848 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.78■□□□□ 0.76
Trove2O08848 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trove2O08848 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trove2O08848 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms