Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr2jO08740 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Polr2jO08740 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr2jO08740 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.63■□□□□ 0.57
Polr2jO08740 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr2jO08740 AA386476-201ENSMUST00000098781 1665 ntBASIC18.63■□□□□ 0.57
Polr2jO08740 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr2jO08740 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr2jO08740 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr2jO08740 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Polr2jO08740 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.62■□□□□ 0.57
Polr2jO08740 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.62■□□□□ 0.57
Polr2jO08740 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr2jO08740 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Polr2jO08740 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Polr2jO08740 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Polr2jO08740 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Polr2jO08740 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Polr2jO08740 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Polr2jO08740 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr2jO08740 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Polr2jO08740 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2jO08740 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2jO08740 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.6■□□□□ 0.57
Polr2jO08740 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Polr2jO08740 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr2jO08740 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Polr2jO08740 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
Polr2jO08740 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr2jO08740 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Polr2jO08740 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Polr2jO08740 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr2jO08740 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2jO08740 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.58■□□□□ 0.57
Polr2jO08740 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Polr2jO08740 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.58■□□□□ 0.56
Polr2jO08740 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.58■□□□□ 0.56
Polr2jO08740 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2jO08740 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Polr2jO08740 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Polr2jO08740 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2jO08740 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Polr2jO08740 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.58■□□□□ 0.56
Polr2jO08740 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2jO08740 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Polr2jO08740 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Polr2jO08740 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Polr2jO08740 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Polr2jO08740 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.57■□□□□ 0.56
Polr2jO08740 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.57■□□□□ 0.56
Polr2jO08740 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Polr2jO08740 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Polr2jO08740 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Polr2jO08740 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms