Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.32□□□□□ -0.44
Ccdc179J3QM76 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc179J3QM76 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc179J3QM76 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.29□□□□□ -0.44
Ccdc179J3QM76 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc179J3QM76 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc179J3QM76 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc179J3QM76 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Gm12922-201ENSMUST00000120626 809 ntBASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc179J3QM76 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms