Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Colca2F8VPY8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
Colca2F8VPY8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Colca2F8VPY8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Colca2F8VPY8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Colca2F8VPY8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Colca2F8VPY8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Gm5643-201ENSMUST00000117081 966 ntBASIC18.68■□□□□ 0.58
Colca2F8VPY8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Gm13836-201ENSMUST00000121159 501 ntBASIC18.68■□□□□ 0.58
Colca2F8VPY8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Colca2F8VPY8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Gm7860-201ENSMUST00000121190 879 ntBASIC18.67■□□□□ 0.58
Colca2F8VPY8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Colca2F8VPY8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Gm12896-201ENSMUST00000118430 226 ntBASIC18.66■□□□□ 0.58
Colca2F8VPY8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Colca2F8VPY8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.65■□□□□ 0.58
Colca2F8VPY8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.65■□□□□ 0.58
Colca2F8VPY8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Colca2F8VPY8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Colca2F8VPY8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.63■□□□□ 0.57
Colca2F8VPY8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.63■□□□□ 0.57
Colca2F8VPY8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
Colca2F8VPY8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.62■□□□□ 0.57
Colca2F8VPY8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.62■□□□□ 0.57
Colca2F8VPY8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Colca2F8VPY8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms