Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.41■□□□□ 0.86
Col4a6B1AVK5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a6B1AVK5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 Trmt13-210ENSMUST00000198454 880 ntBASIC20.39■□□□□ 0.86
Col4a6B1AVK5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a6B1AVK5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col4a6B1AVK5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a6B1AVK5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a6B1AVK5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a6B1AVK5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a6B1AVK5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a6B1AVK5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.35■□□□□ 0.85
Col4a6B1AVK5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a6B1AVK5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.34■□□□□ 0.85
Col4a6B1AVK5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.34■□□□□ 0.85
Col4a6B1AVK5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.34■□□□□ 0.85
Col4a6B1AVK5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a6B1AVK5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a6B1AVK5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a6B1AVK5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a6B1AVK5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a6B1AVK5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms