Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Gm42418-201ENSMUST00000182010 1831 ntBASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Shroom2A2ALU4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC31.45■■■□□ 2.63
Shroom2A2ALU4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Shroom2A2ALU4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Shroom2A2ALU4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
Shroom2A2ALU4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Shroom2A2ALU4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shroom2A2ALU4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shroom2A2ALU4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Shroom2A2ALU4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC31.42■■■□□ 2.62
Shroom2A2ALU4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Shroom2A2ALU4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Shroom2A2ALU4 Nrn1-203ENSMUST00000223611 1443 ntBASIC31.42■■■□□ 2.62
Shroom2A2ALU4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC31.42■■■□□ 2.62
Shroom2A2ALU4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC31.41■■■□□ 2.62
Shroom2A2ALU4 Gm15378-201ENSMUST00000121894 207 ntBASIC31.41■■■□□ 2.62
Shroom2A2ALU4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC31.41■■■□□ 2.62
Shroom2A2ALU4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Shroom2A2ALU4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Shroom2A2ALU4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Shroom2A2ALU4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Shroom2A2ALU4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Shroom2A2ALU4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Shroom2A2ALU4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Shroom2A2ALU4 Alkbh1-212ENSMUST00000185301 408 ntBASIC31.4■■■□□ 2.62
Shroom2A2ALU4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC31.39■■■□□ 2.62
Shroom2A2ALU4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Shroom2A2ALU4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Shroom2A2ALU4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC31.39■■■□□ 2.62
Shroom2A2ALU4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Shroom2A2ALU4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Gm14464-201ENSMUST00000119658 1254 ntBASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC31.38■■■□□ 2.61
Shroom2A2ALU4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Shroom2A2ALU4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Shroom2A2ALU4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Shroom2A2ALU4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Shroom2A2ALU4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Shroom2A2ALU4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Shroom2A2ALU4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Shroom2A2ALU4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Gm13509-201ENSMUST00000119733 1308 ntBASIC31.33■■■□□ 2.61
Shroom2A2ALU4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Shroom2A2ALU4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Shroom2A2ALU4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shroom2A2ALU4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Shroom2A2ALU4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Shroom2A2ALU4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Shroom2A2ALU4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC31.31■■■□□ 2.6
Shroom2A2ALU4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Shroom2A2ALU4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Shroom2A2ALU4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC31.3■■■□□ 2.6
Shroom2A2ALU4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Shroom2A2ALU4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms