Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm3880A0A1B0GSB3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm3880A0A1B0GSB3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm3880A0A1B0GSB3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm3880A0A1B0GSB3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm3880A0A1B0GSB3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Gm3880A0A1B0GSB3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Gm3880A0A1B0GSB3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Ptprs-211ENSMUST00000223859 5588 ntBASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Peli2-204ENSMUST00000226513 1320 ntBASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm3880A0A1B0GSB3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm3880A0A1B0GSB3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm3880A0A1B0GSB3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm3880A0A1B0GSB3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms