Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gm15039-201ENSMUST00000118914 875 ntBASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rpl23a-ps3A0A140T8M7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms