Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.67□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3n-3A0A0G2JEM0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3n-3A0A0G2JEM0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms