Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv19A0A0B4J1H4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv19A0A0B4J1H4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv19A0A0B4J1H4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv19A0A0B4J1H4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm12922-201ENSMUST00000120626 809 ntBASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv19A0A0B4J1H4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv19A0A0B4J1H4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv19A0A0B4J1H4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv19A0A0B4J1H4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv19A0A0B4J1H4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv19A0A0B4J1H4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv19A0A0B4J1H4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trbv19A0A0B4J1H4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv19A0A0B4J1H4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv19A0A0B4J1H4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv19A0A0B4J1H4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv19A0A0B4J1H4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.52■□□□□ 0.07
Trbv19A0A0B4J1H4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv19A0A0B4J1H4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv19A0A0B4J1H4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms