Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.02□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Gm5812-201ENSMUST00000061073 957 ntBASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ighv1-56A0A0A6YXG2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms