Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-7A0A075B6B0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-7A0A075B6B0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6d-7A0A075B6B0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm27454-201ENSMUST00000185090 204 ntBASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6d-7A0A075B6B0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm7143-201ENSMUST00000222811 859 ntBASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-7A0A075B6B0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-7A0A075B6B0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms