Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav12d-3A0A075B6A4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12d-3A0A075B6A4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Fst-202ENSMUST00000223640 2612 ntBASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12d-3A0A075B6A4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12d-3A0A075B6A4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav12d-3A0A075B6A4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12d-3A0A075B6A4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12d-3A0A075B6A4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12d-3A0A075B6A4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12d-3A0A075B6A4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12d-3A0A075B6A4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12d-3A0A075B6A4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms