Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.9■□□□□ 0.14
Trav18A0A075B656 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.9■□□□□ 0.14
Trav18A0A075B656 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav18A0A075B656 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav18A0A075B656 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 AA386476-201ENSMUST00000098781 1665 ntBASIC15.88■□□□□ 0.13
Trav18A0A075B656 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav18A0A075B656 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.87■□□□□ 0.13
Trav18A0A075B656 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Gm14117-201ENSMUST00000122417 843 ntBASIC15.87■□□□□ 0.13
Trav18A0A075B656 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav18A0A075B656 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav18A0A075B656 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav18A0A075B656 Golph3-205ENSMUST00000228671 2842 ntBASIC15.85■□□□□ 0.13
Trav18A0A075B656 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav18A0A075B656 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.84■□□□□ 0.13
Trav18A0A075B656 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav18A0A075B656 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav18A0A075B656 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav18A0A075B656 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms