Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Golph3-205ENSMUST00000228671 2842 ntBASIC15.14■□□□□ 0.01
Trav4-4-dv10A0A075B651 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav4-4-dv10A0A075B651 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav4-4-dv10A0A075B651 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-4-dv10A0A075B651 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.1■□□□□ 0.01
Trav4-4-dv10A0A075B651 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav4-4-dv10A0A075B651 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms