Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-2A0A075B649 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.06□□□□□ -0.32
Trav13-2A0A075B649 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13-2A0A075B649 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13-2A0A075B649 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13-2A0A075B649 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Gm45444-201ENSMUST00000211394 898 ntBASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-2A0A075B649 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13-2A0A075B649 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms