Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Gm45444-201ENSMUST00000211394 898 ntBASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav16nA0A075B634 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Gm7143-201ENSMUST00000222811 859 ntBASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav16nA0A075B634 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav16nA0A075B634 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Mir6236-201ENSMUST00000184437 123 ntBASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16nA0A075B634 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Mir6538-201ENSMUST00000183713 110 ntBASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16nA0A075B634 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav16nA0A075B634 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav16nA0A075B634 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms