Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav1A0A075B5Z4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav1A0A075B5Z4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Trav1A0A075B5Z4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav1A0A075B5Z4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trav1A0A075B5Z4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav1A0A075B5Z4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav1A0A075B5Z4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav1A0A075B5Z4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav1A0A075B5Z4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav1A0A075B5Z4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav1A0A075B5Z4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav1A0A075B5Z4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms