Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm40848-201ENSMUST00000221998 324 ntBASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl40Q9Z2Q5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl40Q9Z2Q5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl40Q9Z2Q5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl40Q9Z2Q5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm43060-201ENSMUST00000200621 289 ntBASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl40Q9Z2Q5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl40Q9Z2Q5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl40Q9Z2Q5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.36■□□□□ 0.69
Mrpl40Q9Z2Q5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl40Q9Z2Q5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.36■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Mrpl40Q9Z2Q5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl40Q9Z2Q5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl40Q9Z2Q5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl40Q9Z2Q5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl40Q9Z2Q5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mrpl40Q9Z2Q5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl40Q9Z2Q5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl40Q9Z2Q5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms