Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn8aQ9WTU3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn8aQ9WTU3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn8aQ9WTU3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn8aQ9WTU3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn8aQ9WTU3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.83■□□□□ 0.77
Scn8aQ9WTU3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn8aQ9WTU3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn8aQ9WTU3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn8aQ9WTU3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn8aQ9WTU3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn8aQ9WTU3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn8aQ9WTU3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Scn8aQ9WTU3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn8aQ9WTU3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Scn8aQ9WTU3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Scn8aQ9WTU3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn8aQ9WTU3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 AV356131-201ENSMUST00000206201 750 ntBASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn8aQ9WTU3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms