Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col13a1Q9R1N9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
Col13a1Q9R1N9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col13a1Q9R1N9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col13a1Q9R1N9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col13a1Q9R1N9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Gm27801-201ENSMUST00000184174 223 ntBASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Gm7977-201ENSMUST00000193787 748 ntBASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col13a1Q9R1N9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col13a1Q9R1N9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.53■□□□□ 0.24
Col13a1Q9R1N9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col13a1Q9R1N9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.52■□□□□ 0.23
Col13a1Q9R1N9 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.52■□□□□ 0.23
Col13a1Q9R1N9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col13a1Q9R1N9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col13a1Q9R1N9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms