Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Gm14117-201ENSMUST00000122417 843 ntBASIC19.05■□□□□ 0.64
Cdh17Q9R100 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh17Q9R100 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Rps24-207ENSMUST00000224568 714 ntBASIC19.04■□□□□ 0.64
Cdh17Q9R100 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh17Q9R100 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.03■□□□□ 0.64
Cdh17Q9R100 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh17Q9R100 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdh17Q9R100 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Cdh17Q9R100 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh17Q9R100 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh17Q9R100 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh17Q9R100 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh17Q9R100 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh17Q9R100 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.01■□□□□ 0.63
Cdh17Q9R100 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdh17Q9R100 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdh17Q9R100 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdh17Q9R100 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh17Q9R100 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh17Q9R100 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.99■□□□□ 0.63
Cdh17Q9R100 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Golgb1-201ENSMUST00000023534 498 ntBASIC18.98■□□□□ 0.63
Cdh17Q9R100 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh17Q9R100 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh17Q9R100 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdh17Q9R100 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.97■□□□□ 0.63
Cdh17Q9R100 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh17Q9R100 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh17Q9R100 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms