Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nubp2Q9R061 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Serp2-204ENSMUST00000228055 705 ntBASIC17.23■□□□□ 0.35
Nubp2Q9R061 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nubp2Q9R061 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.22■□□□□ 0.35
Nubp2Q9R061 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nubp2Q9R061 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nubp2Q9R061 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.21■□□□□ 0.35
Nubp2Q9R061 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nubp2Q9R061 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Nubp2Q9R061 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Mir7075-201ENSMUST00000184187 82 ntBASIC17.2■□□□□ 0.34
Nubp2Q9R061 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.2■□□□□ 0.34
Nubp2Q9R061 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Gm6139-201ENSMUST00000079261 882 ntBASIC17.19■□□□□ 0.34
Nubp2Q9R061 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nubp2Q9R061 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nubp2Q9R061 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.17■□□□□ 0.34
Nubp2Q9R061 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp2Q9R061 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp2Q9R061 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.16■□□□□ 0.34
Nubp2Q9R061 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp2Q9R061 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms