Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.71■□□□□ 0.59
Ube4bQ9ES00 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube4bQ9ES00 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ube4bQ9ES00 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ube4bQ9ES00 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.68■□□□□ 0.58
Ube4bQ9ES00 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4bQ9ES00 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.66■□□□□ 0.58
Ube4bQ9ES00 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms