Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubb3Q9ERD7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Serp2-204ENSMUST00000228055 705 ntBASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubb3Q9ERD7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tubb3Q9ERD7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubb3Q9ERD7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb3Q9ERD7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubb3Q9ERD7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.37■□□□□ 0.69
Tubb3Q9ERD7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubb3Q9ERD7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tubb3Q9ERD7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubb3Q9ERD7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Tubb3Q9ERD7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubb3Q9ERD7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb3Q9ERD7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb3Q9ERD7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tubb3Q9ERD7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb3Q9ERD7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubb3Q9ERD7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubb3Q9ERD7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms