Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Echdc3Q9D7J9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Echdc3Q9D7J9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Echdc3Q9D7J9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Echdc3Q9D7J9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Gm9959-201ENSMUST00000068277 390 ntBASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Echdc3Q9D7J9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Echdc3Q9D7J9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Echdc3Q9D7J9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Gm7417-201ENSMUST00000192950 473 ntBASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Echdc3Q9D7J9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Etf1-202ENSMUST00000180351 108 ntBASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Echdc3Q9D7J9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.86■□□□□ 0.61
Echdc3Q9D7J9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms