Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift27Q9D0P8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.8■□□□□ 0.44
Ift27Q9D0P8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift27Q9D0P8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift27Q9D0P8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift27Q9D0P8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ift27Q9D0P8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ift27Q9D0P8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ift27Q9D0P8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.77■□□□□ 0.43
Ift27Q9D0P8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ift27Q9D0P8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Gm7332-201ENSMUST00000118351 454 ntBASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ift27Q9D0P8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ift27Q9D0P8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms