Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Gm5921-201ENSMUST00000075898 882 ntBASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim13Q9CYB0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim13Q9CYB0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim13Q9CYB0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trim13Q9CYB0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Trim13Q9CYB0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim13Q9CYB0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim13Q9CYB0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim13Q9CYB0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim13Q9CYB0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim13Q9CYB0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim13Q9CYB0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim13Q9CYB0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim13Q9CYB0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms