Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ssr1Q9CY50 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ssr1Q9CY50 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssr1Q9CY50 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssr1Q9CY50 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssr1Q9CY50 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.06■□□□□ 0.96
Ssr1Q9CY50 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Gm43530-201ENSMUST00000195920 274 ntBASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssr1Q9CY50 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Mir6236-201ENSMUST00000184437 123 ntBASIC21.04■□□□□ 0.96
Ssr1Q9CY50 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssr1Q9CY50 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssr1Q9CY50 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.02■□□□□ 0.96
Ssr1Q9CY50 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssr1Q9CY50 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ssr1Q9CY50 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.95
Ssr1Q9CY50 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssr1Q9CY50 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Ssr1Q9CY50 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ssr1Q9CY50 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ssr1Q9CY50 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssr1Q9CY50 Gm22238-201ENSMUST00000175222 88 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms