Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim8Q99PJ2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim8Q99PJ2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim8Q99PJ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim8Q99PJ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim8Q99PJ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim8Q99PJ2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim8Q99PJ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim8Q99PJ2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim8Q99PJ2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Trim8Q99PJ2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim8Q99PJ2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.03■□□□□ 0.64
Trim8Q99PJ2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim8Q99PJ2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim8Q99PJ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim8Q99PJ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim8Q99PJ2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.02■□□□□ 0.64
Trim8Q99PJ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim8Q99PJ2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim8Q99PJ2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Trim8Q99PJ2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Rps24-207ENSMUST00000224568 714 ntBASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim8Q99PJ2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms