Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.67■■□□□ 1.22
Pcdh15Q99PJ1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh15Q99PJ1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh15Q99PJ1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh15Q99PJ1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh15Q99PJ1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh15Q99PJ1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.65■■□□□ 1.22
Pcdh15Q99PJ1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdh15Q99PJ1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh15Q99PJ1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Pcdh15Q99PJ1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Pcdh15Q99PJ1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh15Q99PJ1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh15Q99PJ1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pcdh15Q99PJ1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh15Q99PJ1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh15Q99PJ1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Pcdh15Q99PJ1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh15Q99PJ1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdh15Q99PJ1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.58■■□□□ 1.2
Pcdh15Q99PJ1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.57■■□□□ 1.2
Pcdh15Q99PJ1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh15Q99PJ1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.57■■□□□ 1.2
Pcdh15Q99PJ1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh15Q99PJ1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Pcdh15Q99PJ1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh15Q99PJ1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh15Q99PJ1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh15Q99PJ1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh15Q99PJ1 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.55■■□□□ 1.2
Pcdh15Q99PJ1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh15Q99PJ1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh15Q99PJ1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms