Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.98■□□□□ 0.63
Msh4Q99MT2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh4Q99MT2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Msh4Q99MT2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.95■□□□□ 0.62
Msh4Q99MT2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.95■□□□□ 0.62
Msh4Q99MT2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Serp2-204ENSMUST00000228055 705 ntBASIC18.94■□□□□ 0.62
Msh4Q99MT2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Msh4Q99MT2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Msh4Q99MT2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh4Q99MT2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh4Q99MT2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh4Q99MT2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.92■□□□□ 0.62
Msh4Q99MT2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh4Q99MT2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh4Q99MT2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh4Q99MT2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.9■□□□□ 0.62
Msh4Q99MT2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.9■□□□□ 0.62
Msh4Q99MT2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh4Q99MT2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms