Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.32■■□□□ 1
Rtfdc1Q99K95 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.32■■□□□ 1
Rtfdc1Q99K95 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rtfdc1Q99K95 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rtfdc1Q99K95 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtfdc1Q99K95 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rtfdc1Q99K95 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rtfdc1Q99K95 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.31■■□□□ 1
Rtfdc1Q99K95 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.31■■□□□ 1
Rtfdc1Q99K95 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rtfdc1Q99K95 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rtfdc1Q99K95 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtfdc1Q99K95 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.3■■□□□ 1
Rtfdc1Q99K95 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rtfdc1Q99K95 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Rtfdc1Q99K95 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.29■■□□□ 1
Rtfdc1Q99K95 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rtfdc1Q99K95 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.28■■□□□ 1
Rtfdc1Q99K95 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Rtfdc1Q99K95 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rtfdc1Q99K95 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.27■■□□□ 1
Rtfdc1Q99K95 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtfdc1Q99K95 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtfdc1Q99K95 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtfdc1Q99K95 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtfdc1Q99K95 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.27■□□□□ 0.99
Rtfdc1Q99K95 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtfdc1Q99K95 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rtfdc1Q99K95 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtfdc1Q99K95 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 Gm7514-201ENSMUST00000209475 934 ntBASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtfdc1Q99K95 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtfdc1Q99K95 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms