Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Nespas-201ENSMUST00000143738 1083 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd2Q99JR8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 AA386476-201ENSMUST00000098781 1665 ntBASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd2Q99JR8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Gm10653-202ENSMUST00000139570 835 ntBASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd2Q99JR8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd2Q99JR8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Smarcd2Q99JR8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.83■□□□□ 0.76
Smarcd2Q99JR8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd2Q99JR8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd2Q99JR8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smarcd2Q99JR8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd2Q99JR8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Gm6420-201ENSMUST00000193885 723 ntBASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd2Q99JR8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd2Q99JR8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms